ylmA [2019-04-24 13:33:57]

similar to [SW|ABC transporter] (ATP-binding protein)

locus: BSU15340

pI: 5.13

mw: 29.58 kDa

protein length: 264 aa

gene length: 795 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

Gene

Coordinates: 1,606,560 → 1,607,354

The protein

Protein family

• [SW|ABC transporter] domain (according to Swiss-Prot)

Structure

• [PDB|2IHY] (from Staphylococcus aureus, 42% identity)

additional information

• belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]

Expression and Regulation

Operons

• genes: [gene|E12006960D9C75EBD4CD79A84B80BE51A9CC79D2|ylmA]
  description: [pubmed|22383849]

  regulatory mechanism

  • [protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY]: repression, [Pubmed|18083814], in [regulon|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY regulon]

Biological materials

Mutant

• MGNA-B123 (ylmA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1122 NBRP B. subtilis, Japan]
• BKE15340 (Δ[gene|E12006960D9C75EBD4CD79A84B80BE51A9CC79D2|ylmA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTGGTCCTCCTCTTTA, downstream forward: _UP4_ACGAATGCCTGACAAATATA
• BKK15340 (Δ[gene|E12006960D9C75EBD4CD79A84B80BE51A9CC79D2|ylmA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTGGTCCTCCTCTTTA, downstream forward: _UP4_ACGAATGCCTGACAAATATA

References

• 10092453,15378759,18083814